AirHint found the following cheapest return flights from San Diego (SAN) to Tokyo (NRT) in June 2026 (see full year).

Return flights

03 Jun - 24 Jun	Air Canada
01 Jun - 21 Jun	Korean Air
19 Jun - 28 Jun	Air Canada
02 Jun - 21 Jun	Air Canada
25 Jun - 02 Jul	Air Canada
03 Jun - 24 Jun	Japan Airlines	direct
02 Jun - 21 Jun	Japan Airlines	direct
19 Jun - 28 Jun	Japan Airlines	direct
01 Jun - 21 Jun	American Airlines	direct
25 Jun - 02 Jul	Japan Airlines	direct

Also check the deals for one-way flights from San Diego to Tokyo in June.

The deals are updated regularly. The prices may go up as tickets are purchased by other travellers. Only the cheapest flights are offered. Select a price to book and secure these cheap prices.

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Cheapest return flights from San Diego to Tokyo in June from 864€

Return flights