AirHint found the following cheapest return flights from Tokyo (NRT) to Prague (PRG) in September 2025 (see full year).

Return flights

21 Sep - 28 Sep	Qatar Airways
30 Sep - 17 Oct	Etihad Airways
28 Sep - 05 Oct	SWISS
21 Sep - 29 Sep	Etihad Airways
24 Sep - 29 Sep	KLM
29 Sep - 04 Oct	Qatar Airways
26 Sep - 30 Sep	Qatar Airways
26 Sep - 03 Oct	Qatar Airways
30 Sep - 03 Oct	KLM
23 Sep - 28 Sep	Qatar Airways
30 Sep - 08 Oct	Qatar Airways
25 Sep - 27 Sep	Qatar Airways
22 Sep - 25 Sep	KLM
28 Sep - 04 Oct	Emirates
26 Sep - 04 Oct	Emirates
21 Sep - 30 Sep	SWISS

Also check the deals for one-way flights from Tokyo to Prague in September.

The deals are updated regularly. The prices may go up as tickets are purchased by other travellers. Only the cheapest flights are offered. Select a price to book and secure these cheap prices.

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Cheapest return flights from Tokyo to Prague in September from 1050€

Return flights