AirHint found the following cheapest return flights from Heraklion (HER) to Prague (PRG) in June 2026 (see full year).

Return flights

14 Jun - 27 Jun	SKY express
03 Jun - 14 Jun	SKY express
03 Jun - 07 Jun	SKY express
03 Jun - 05 Jun	SKY express
01 Jun - 14 Jun	SKY express
01 Jun - 07 Jun	SKY express
01 Jun - 05 Jun	SKY express
24 Jun - 27 Jun	SKY express
17 Jun - 27 Jun	SKY express
14 Jun - 01 Jul	SKY express
03 Jun - 08 Jun	SKY express
24 Jun - 01 Jul	SKY express
17 Jun - 01 Jul	SKY express

Also check the deals for one-way flights from Heraklion to Prague in June.

The deals are updated regularly. The prices may go up as tickets are purchased by other travellers. Only the cheapest flights are offered. Select a price to book and secure these cheap prices.

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Cheapest return flights from Heraklion to Prague in June from 249€

Return flights