AirHint found the following cheapest return flights from Heraklion (HER) to Amsterdam (AMS) in September 2025 (see full year).

Return flights

12 Sep - 19 Sep	Air Serbia
05 Sep - 09 Sep	transavia	direct
01 Sep - 08 Sep	Air Serbia
08 Sep - 12 Sep	transavia	direct
01 Sep - 05 Sep	Air Serbia
11 Sep - 15 Sep	Aegean Airlines
26 Sep - 01 Oct	Air Serbia
18 Sep - 21 Sep	Aegean Airlines
18 Sep - 22 Sep	Aegean Airlines
22 Sep - 29 Sep	Air Serbia
19 Sep - 30 Sep	Air Serbia
26 Sep - 01 Oct	transavia	direct
30 Sep - 06 Oct	Aegean Airlines
30 Sep - 06 Oct	transavia	direct
17 Sep - 03 Oct	TUI.nl	direct
17 Sep - 08 Oct	TUI.nl	direct
17 Sep - 05 Oct	TUI.nl	direct
17 Sep - 07 Oct	TUI.nl	direct
23 Sep - 03 Oct	TUI.nl	direct
23 Sep - 08 Oct	TUI.nl	direct

Also check the deals for one-way flights from Heraklion to Amsterdam in September.

The deals are updated regularly. The prices may go up as tickets are purchased by other travellers. Only the cheapest flights are offered. Select a price to book and secure these cheap prices.

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Cheapest return flights from Heraklion to Amsterdam in September from 200€

Return flights