AirHint found the following cheapest return flights from Heraklion (HER) to Amsterdam (AMS) in September 2025 (see full year).

Return flights

18 Sep - 21 Sep	Ryanair
30 Sep - 08 Oct	Aegean Airlines
22 Sep - 26 Sep	Aegean Airlines
21 Sep - 26 Sep	Aegean Airlines
25 Sep - 28 Sep	Aegean Airlines
03 Sep - 17 Sep	transavia	direct
21 Sep - 03 Oct	Aegean Airlines
16 Sep - 30 Sep	SKY express
16 Sep - 01 Oct	SKY express
16 Sep - 07 Oct	SKY express
16 Sep - 05 Oct	SKY express
16 Sep - 19 Sep	Aegean Airlines
19 Sep - 21 Sep	Aegean Airlines
03 Sep - 19 Sep	transavia	direct
26 Sep - 30 Sep	Ryanair
30 Sep - 09 Oct	Lufthansa
16 Sep - 03 Oct	SKY express
27 Sep - 01 Oct	Aegean Airlines
17 Sep - 01 Oct	TUI.nl	direct
17 Sep - 07 Oct	TUI.nl	direct

Also check the deals for one-way flights from Heraklion to Amsterdam in September.

The deals are updated regularly. The prices may go up as tickets are purchased by other travellers. Only the cheapest flights are offered. Select a price to book and secure these cheap prices.

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Cheapest return flights from Heraklion to Amsterdam in September from 201€

Return flights